BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B08SP1|AL428854
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1762 1664 0.0
>3x_Contig1762
Length = 22098
Score = 1664 bits (833), Expect = 0.0
Identities = 858/873 (98%)
Strand = Plus / Plus
Query: 1 gatttaaagawctcaaatgtgacggttgcattttttaattctttatttcaagtatccaaa 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15440 gatttaaagatctcaaatgtgacggttgcattttttaattctttatttcaagtatccaaa 15499
Query: 61 gcggtcagtaatcataaaggtttatatgtgacggataacgaaagaatgcagatgtggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15500 gcggtcagtaatcataaaggtttatatgtgacggataacgaaagaatgcagatgtggatg 15559
Query: 121 ttcaagtaacagcgaatgamaacgtccaatagaattatatatagadatggatgsttaata 180
||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 15560 ttcaagtaacagcgaatgacaacgtccaatagaattatatatagatatggatgcttaata 15619
Query: 181 aatwaawaggttacagtagaagtataaatdagtagtattaagaaccgattaagagtgtaw 240
||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 15620 aattaataggttacagtagaagtataaattagtagtattaagaaccgattaagagtgtat 15679
Query: 241 acaggtagcttagttcgtccaaaaaacaaaattagagttgtaagtatcgggtgactattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15680 acaggtagcttagttcgtccaaaaaacaaaattagagttgtaagtatcgggtgactattt 15739
Query: 301 taagcatccgaatcgtccatatcttcagatctatgggccaattctctggtattgacacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15740 taagcatccgaatcgtccatatcttcagatctatgggccaattctctggtattgacacca 15799
Query: 361 tttctttgaacgtatttagttttcagcacagtatgttccagcatatcgcatacttgtaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15800 tttctttgaacgtatttagttttcagcacagtatgttccagcatatcgcatacttgtaat 15859
Query: 421 gcagatttcaagtcttgcgttataagtgcttgtktcaaagagttgatgagcgaagggttc 480
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 15860 gcagatttcaagtcttgcgttataagtgcttgtttcaaagagttgatgagcgaagggttc 15919
Query: 481 cccatcgaattattatgaggagaaatacctgtcaaagacgctaagcatgcagagaggtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15920 cccatcgaattattatgaggagaaatacctgtcaaagacgctaagcatgcagagaggtca 15979
Query: 541 ttatattcggactcatagaaagacacatccgcttcaatccgtttgatgtattccttcttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15980 ttatattcggactcatagaaagacacatccgcttcaatccgtttgatgtattccttcttc 16039
Query: 601 cgttttctgaaccttgaagcagcaattctattcctttccaagaattccttacgcttacga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16040 cgttttctgaaccttgaagcagcaattctattcctttccaagaattccttacgcttacga 16099
Query: 661 gctctgtctgcatccgtatcgccgggatatgagtctatatcaaaaaaaawttccgaatga 720
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 16100 gctctgtctgcatccgtatcgccgggatatgagtctatatcataaggtgtttccgaatga 16159
Query: 721 tgatcggaatcattaggcgatacctttgatttggatttcgaagaagtagaagcctttctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16160 tgatcggaatcattaggcgatacctttgatttggatttcgaagaagtagaagcctttctt 16219
Query: 781 ttcttagaagtcggtttgctgacctttgacgaggtaccgttgacgttttccttgctttcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16220 ttcttagaagtcggtttgctgacctttgacgaggtaccgttgacgttttccttgctttcg 16279
Query: 841 gctggttcattactagcagtattattggtactg 873
|||||||||||||||||||||||||||||||||
Sbjct: 16280 gctggttcattactagcagtattattggtactg 16312
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5871
Number of Sequences: 1807
Number of extensions: 5871
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)